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Electrophoresis

1970
  • Arne Tiselius
Laboratory gel electrophoresis apparatus separating DNA samples by size.

(generated image for illustration only)

Gel electrophoresis is a technique used to separate macromolecules like DNA, RNA, and proteins based on their size and charge. An electric field is applied to a gel matrix, causing negatively charged molecules (like DNA) to move towards the positive electrode. Smaller molecules migrate faster and further through the pores of the gel than larger molecules.

Gel electrophoresis is a cornerstone technique in molecular biology for the separation and analysis of macromolecules, primarily DNA, RNA, and proteins. The principle behind the technique is the migration of charged molecules through a porous gel matrix under the influence of an electric field. Since nucleic acids (DNA and RNA) have a consistently negative charge due to their phosphate backbone, they will naturally migrate towards the positive electrode (anode) when a current is applied. The gel itself, typically made of agarose for larger molecules like genomic DNA fragments or polyacrylamide for smaller fragments and proteins (in a technique called PAGE), acts as a molecular sieve. The matrix is composed of a network of pores through which the molecules must travel. Smaller molecules navigate this maze more easily and quickly than larger molecules, which are impeded more by the gel matrix. Consequently, the molecules are separated based on their size, with the smallest traveling the farthest from the starting point (the well) in a given amount of time. To perform DNA electrophoresis, a sample is first loaded into wells at one end of the gel. A ‘DNA ladder,’ a mixture of DNA fragments of known sizes, is run in a separate lane to serve as a reference for estimating the size of the unknown fragments. After the electric current is applied for a period, the separated fragments are visualized. Because DNA is invisible to the naked eye, a fluorescent dye that intercalates with the DNA, such as ethidium bromide or SYBR Green, is used. When placed under UV light, the dye fluoresces, revealing the DNA as distinct bands, each band representing a collection of fragments of the same size.

UNESCO Nomenclature: 2401
– Biochemistry

Type

Physical Process

Disruption

Foundational

Usage

Widespread Use

Precursors

  • Michael Faraday’s laws of electrolysis
  • discovery of electricity
  • Arne Tiselius’s development of moving boundary electrophoresis
  • development of support media like paper, starch, and eventually agarose/polyacrylamide gels
  • discovery of DNA and its negative charge

Applications

  • DNA fingerprinting
  • paternity testing
  • diagnosing genetic disorders
  • purifying DNA fragments for cloning
  • analyzing PCR products
  • protein analysis (SDS-PAGE)

Patents:

NA

Potential Innovations Ideas

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Related to: gel electrophoresis, DNA separation, agarose gel, polyacrylamide, SDS-PAGE, DNA fingerprinting, molecular weight, restriction fragments, nucleic acids, proteins.

Historical Context

Electrophoresis

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1983

(if date is unknown or not relevant, e.g. "fluid mechanics", a rounded estimation of its notable emergence is provided)

Related Invention, Innovation & Technical Principles

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