Southern印迹法

Southern印迹法以其发明者Edwin Southern的名字命名，是一种强大而特异的检测复杂DNA混合物中目标DNA序列的方法。在广泛应用之前，它是分子遗传学的一项基础技术。 PCR and sequencing. The process is a multi-step procedure that combines size separation with specific molecular recognition. It begins with the digestion of the total genomic DNA sample using one or more restriction enzymes, which cleaves the DNA into fragments of varying sizes. These fragments are then separated according to their size by agarose gel electrophoresis. The gel now contains a smear of countless DNA fragments, sorted by length. The crucial next step is the transfer, or ‘blotting,’ of these separated DNA fragments from the fragile gel onto a more durable membrane, typically made of nitrocellulose or nylon. This is achieved through capillary action, which wicks a buffer solution through the gel and the membrane, carrying the DNA along with it and immobilizing it on the membrane’s surface. The DNA is first denatured into single strands so it can bind to the probe. The membrane now holds a faithful replica of the DNA fragment pattern from the gel. To find the specific gene of interest among the thousands of fragments, a labeled probe is used. This probe is a single-stranded piece of DNA (or RNA) that has a sequence complementary to the target gene and is tagged with a marker, such as a radioactive isotope ([latex]^{32}P[/latex]) or a fluorescent/chemiluminescent molecule. The membrane is incubated with this probe, which hybridizes (forms a double helix) only with its complementary DNA fragment on the membrane. After washing away any unbound probe, the location of the hybridized probe is detected, revealing a band that corresponds to the size of the DNA fragment containing the target gene.